- Open Access
Development of an animal-borne “sonar tag” for quantifying prey availability: test deployments on northern elephant seals
Animal Biotelemetry volume 3, Article number: 22 (2015)
Developments in electronic tagging technologies have provided unprecedented insight into the movements and behavior of marine predators. Concurrent information on the prey of these tracked animals, however, is mostly lacking. We developed and tested a prototype autonomous echosounder (aka the sonar tag) for deployment on large marine animals intended to provide quantification of their prey fields.
The resulting fully autonomous, internally recording prototype sonar tag operated at a power of 1 W and a frequency of 200 kHz. A series of test deployments were successfully conducted on four juvenile female elephant seals (Mirounga angustirostris) captured at the Año Nuevo State Reserve, California, and released short distances away. Translocated seals were instrumented with a sonar tag and a Fastloc GPS tag with an integrated time-depth recorder (TDR). All four animals returned to land after 3–18 days, making dives to depths of up to 778 m. Strong backscattering from the bottom was observed during many dives, indicating an often close association with the seafloor. Numerous observations of strongly scattering targets, potentially indicative of prey, were also made in the water column, often associated with particular dive and movement behaviors. During dives identified as foraging-type and also travel-type, one animal with the acoustic transducer on its head showed successive targets getting increasingly closer to the animal, possibly consistent with prey pursuit.
These results demonstrate the value of active acoustic backscattering measurements made from free-ranging animals, complementing the ecological insight afforded by traditional depth- and position-logging tags. Future refinements will include further miniaturization, performance optimization, and extensions in the deployment duration.
Recent developments in electronic tagging technologies have provided unprecedented insight into the movements and behavior of a variety of large marine predators at spatial and temporal scales previously inaccessible via traditional sampling techniques [1–6]. Examining the relationships of movements and behavioral decisions revealed by such technologies with the animal’s physical and biological environment is an active area of investigation [7, 8]. Some tags are capable of measuring physical and biological parameters such as temperature, salinity, and chlorophyll-a, and can be correlated to tag observations of the animal’s behavior made at the same scale and resolution [9–13]. Behavioral patterns can also be examined in relation to remote satellite observations of environmental conditions (e.g., temperature, chlorophyll-a ). Information on the in situ abundance of the prey exploited by these top predators, however, has been more difficult to obtain.
Typically, information on the relative availability of prey has been inferred from changes in the behavior of tagged animals through time [e.g., 10, 15, 16]. In the case of northern and southern elephant seals (Mirounga angustirostris and Mirounga leonina), for instance, small-scale changes in movement and diving behaviors have been related to changes in oceanographic variables and, presumably, changes in prey availability and perhaps prey type. Indirect metrics of foraging have included measurements of surface movements (e.g., transit rate, indices of area-restricted search) and dive characteristics (e.g., frequency of “drift dives” thought to be postprandial), often coupled to estimates of energy gain based on pre- and post-trip measurements of body composition [3, 9, 10, 14, 17–20]. Jaw motion events recorded by accelerometers have also been used as an index of feeding, with initial deployments on adult female northern elephant seals suggesting that feeding occurred during the majority of dives, including during dive types and movement patterns believed previously not to be associated with feeding . These approaches provide valuable estimates of when and how much prey the animal consumed, but provide little or no information on prey distribution, which is also critical to understanding the foraging ecology of top predators.
Direct measurements of prey fields relative to the foraging behavior of top predators have often been made via sampling from vessels with acoustic, optical, and/or net sampling methods conducted concurrent or nearby to predators observed through ship-based visual surveys [e.g., 22, 23] or tracked with various tagging technologies (e.g., blue whales ; right whales ; humpback whales [26, 27]). This latter approach is logistically quite demanding, however, as it requires that a ship remain in close contact with the tracked animal while prey sampling is carried out, and is difficult to carry out at night. As such these studies have been limited to relatively short time (hours to days) and small spatial (kilometers) scales. Furthermore, there is still a spatial and temporal mismatch between the predator and prey observations that introduces uncertainty into attempts to correlate the two at fine scales. There are a few methods that have provided direct data on rates of prey encounter along with rates of prey ingestion. For echolocating cetaceans, acoustic recording tags can be used to record echoes from prey resulting from the tagged animal’s echolocations . Video or still camera systems attached to a variety of marine species, including seals, turtles, and seabirds have been used with success to capture direct images of prey and estimate prey density, although these are limited by memory and power considerations and can only sample to short ranges given the rapid attenuation of light in seawater .
High-frequency active acoustic systems deployed from vessels are often used to characterize the distribution of zooplankton and fish prey for higher predators [22–24, 26, 30] and offer an attractive option for quantifying prey abundance associated with tag observations of animal behavior. Active acoustic backscattering systems, or echosounders, operate by emitting pulses of sound and measuring echoes returned back to the transducer (i.e., backscattering). The intensity of backscattering provides information on the abundance and nature of organisms in the water column while the time-delay provides information on their range; the latter is the principle underlying sonar (originally an acronym for SOund Navigation And Ranging). Sound attenuates in water less than light and so active acoustic systems can provide remote and non-intrusive samples at high resolution and sampling to larger ranges than camera systems. Substantial recent progress has also been made in reducing the power consumption of active acoustic systems and in miniaturizing transceiver components, making deployment on increasingly small autonomous platforms a possibility. The development of a miniaturized echosounder intended for potential attachment to marine animals has been reported previously . To our knowledge, however, active acoustic devices have not previously been successfully deployed on marine animals, but could provide important new information on prey distribution at previously inaccessible spatial and temporal scales.
The objectives of this study were to develop a compact, autonomous, high-frequency echosounder for deployment on live animals and to conduct test deployments of this prototype “sonar tag” system on juvenile northern elephant seals. Juvenile elephant seals translocated short distances away from the Año Nuevo State Reserve north of Santa Cruz, California, are known to return to the Año Nuevo or a nearby colony after time periods of hours to days, making a series of dives to depths of up to 900 m during their return transit . The behavior of translocated animals thus closely mimics their natural behavior, allowing new tag technologies to be tested under real-world conditions and within short amounts of time [e.g., 33–35]. The focus of the present work is on data recorded by the prototype sonar tag and associated depth- and position-logging tags during a series of test deployments. The goals are first to verify the nature of the acoustic backscattering relative to known or expected patterns, such as from the sea floor and the deep scattering layer (a pervasive acoustic layer often evident in off-shelf waters, typically comprised of small fishes and large invertebrates); and second to provide initial insight into elephant seal dive behavior and foraging ecology. The broader aim of this work is to assess the value of the approach of using active acoustics in the study of foraging ecology via the direct characterization of the prey fields of free-ranging tagged top predators over long, and ecologically relevant, time scales.
Sonar tag specifications
The sonar tag was based on a high-frequency Doppler sonar board developed originally for boundary layer turbulence studies  and later modified for measurement of acoustic backscattering and applications involving the characterization of pelagic animal abundance. Relative to other active acoustic devices, the board is compact, autonomous, low power, and low-cost, and was designed for use on autonomous platforms. The system has been used at frequencies ranging from 100 kHz to 2 MHz and is capable of transmitting and receiving both narrowband (i.e., single-frequency) or broadband signals (i.e., spanning a broad and continuous frequency band). It is composed of a single 13.3 × 3.8 cm circuit board that includes a transmit/receive circuit, 24 MHz analog-to-digital converter, a low-power Digital Signal Processor (DSP), and 32 GB flash memory card. The system requires a supplied voltage between 4 and 32 V and has a total power consumption less than or equal to 1 W. The DSP allows for the execution of pre-programmed mission instructions such as duty cycling the system between pinging and not pinging (i.e., idling). The ping rate, sample range, sampling frequency, decimation rate, gains, and transmit signal can all be adjusted by the user according to the application at hand.
Certain modifications to this generic sonar module design were required in developing the sonar tag. The transmit/receive circuitry was redesigned and optimized for impedance matching with a 200 kHz transducer. Custom battery packs were built from 26 AA disposable lithium batteries wired together (with diodes as necessary) to supply the desired voltages. The voltage supplied to the board was 6 V and a separate input voltage (0.6, 1, 1.5, 3, or 6 V, varying between different tests) was supplied to the transmitter via a linear power regulator external to the board; the output voltage supplied to the transducer from the transmitter was then increased by a factor of 10. A modular approach to packaging the system was used where the battery and electronics were housed separately. The design goal for this prototype was to keep the maximum size below that which has been used previously on juvenile elephant seals (10 × 36 cm cylinder ), with the intent of miniaturizing further in the future. The final system was comprised of one custom cylindrical aluminum housing for the electronics and one for the batteries (each 7.9 cm diameter × 17.0 cm length) cabled together, with the electronics housing also cabled to a cylindrical transducer (10.2 cm diameter × 5.8 cm length). The transducer was mounted on a cradle made of a rigid plastic (Delrin) and was surrounded and backed by a layer of corprene baffling material (a mixture of neoprene and cork). The corprene was intended to reduce sound output toward the animal although it is a compressible material and attenuation thus is decreased at depth (from 5 dB/cm near sea level to 1 dB/cm at ca. 400 m depth ). Together, the system components weighed 4.34 kg in air and 1.7 kg in water.
The system used an Airmar transducer with a center frequency of 200 kHz, chosen to be outside the elephant seal’s hearing range  and to be consistent with frequencies commonly used in fisheries acoustics. At the nominal frequency of 200 kHz, the transducer had a full beam-width (3 dB down) of 8 °, with first side-lobes at ca. 15 ° off-axis that were ca. 18 dB down relative to on-axis, second side-lobes at ca. 45 ° that were ca. 28 dB down, and a lobe at 180 ° that was ca. 28 dB down. A variety of transmit signal types were explored, including narrowband tones and linear frequency modulated broadband signals (limited by the transducer’s frequency response to ca. 20 kHz bandwidth). The final transmit signal selected was a 200 kHz gated sine wave of duration 150 μs, with a ping rate of 1 Hz. This short, and hence low power, signal produced the least sound at lower frequencies. To further reduce the level of sub-harmonics, the transmit pulse was tapered using the pulse width modulation technique , linearly increasing from 1 to 50 % at the end of the 150 μs pulse.
Calibrations and performance tests
Calibrations were performed following the standard target method [40, 41] using tungsten carbide spheres (5 % cobalt binder) with diameters of 12, 21.2, and 38.1 mm. The acoustic properties and expected target strength for these targets are known, and hence calibrations allow absolute backscattering levels to be calculated from relative measurements of digitized signal strength. Signal-to-noise ratios were measured relative to range and operating voltage using standard targets suspended at multiple ranges. The full system was pressure tested to the equivalent of 2000 m in depth.
Source levels were quantified relative to frequency and angle off-axis while operating the system at a series of transmitter input voltages using a Reson Model TC4047 calibrated hydrophone in a specialized tank (3.7 m diameter × 3.7 m deep). This hydrophone was chosen as it not only is optimized for use in the 1–100 kHz band, allowing high-accuracy measurements within the range in which elephant seals hear , but also has a useable frequency response in the 100–200 kHz band, allowing measurements of source level at the nominal operating frequency of 200 kHz. The hydrophone was positioned 1 m from the transducer face. Spectra of source levels vs. frequency were calculated by taking the Fourier transform of the isolated direct-path incident pulse from the transducer. The transducer was mounted on a rotating platform, and source level measurements were made in 5 ° increments.
Test deployments of two identical prototype sonar tag units were conducted in April–May of 2012 on juvenile elephant seals translocated from the colony at Año Nuevo State Reserve to coastal locations along Monterey Bay.
Over the course of the field effort, four healthy juvenile female seals were selected based on size and overall appearance, and when feasible were known from an ongoing flipper-tagging program to have been born at Año Nuevo. This increased the likelihood that they would return to the Año Nuevo colony after translocation. The animals were sedated using an intramuscular injection of Telazol (teletamine/zolazepam HCl) at a dose of approximately 1.0 mg per 100 kg. Sedation was maintained with intravenous doses of ketamine (100 mg.mL−1) as necessary. Upon initial sedation, a series of morphometric measurements were taken, including weight, length, and blubber thickness. The seals were transported in a specially designed aluminum cage to the Long Marine Laboratory of the University of California Santa Cruz, where the tags were attached.
The sonar tag’s electronics and battery housings were tie-wrapped to a cloth mesh patch and mounted in-line with one another along the animal’s midline in the mid-dorsal region by gluing the mesh to the animal’s pelage using a 5-min marine epoxy (Loctite). The electronics housing connected via a cable to the acoustic transducer, similarly mounted on either the animal’s shoulder region (aimed to the side) or head (aimed forward). An ARGOS-linked Mk10 Fastloc GPS tag with integrated time-depth recorder (TDR, Wildlife Computers, Washington) and a Mk9 three-dimensional accelerometer/magnetometer (Wildlife Computers, Washington; data not analyzed in this study) were also secured to the animal’s head and posterior dorsal region, respectively, to provide track, movement, and dive data. A radio transmitter (148–150 MHz frequency) was attached to the mid-dorsal region to facilitate location of the animal once it returned to shore. The combined weight of these instruments (excluding the sonar tag) was 0.4 kg and volume of 212 cm3. Seal handling took a maximum of 120 min. The seals were then transported by truck to release locations along Monterey Bay. At-sea movements of the seals were monitored via ARGOS satellite uplinks, allowing the animals to be recaptured shortly after their return to land. The same sedation protocol was used to immobilize the animals during recapture, at which time the sonar tag package and other instruments were removed from the mounting system with the animals on the beach, and new morphometric measurements were collected.
Tag effect tests
A series of measures was taken in order to assess possible effects of the sonar tag on the study animals. Each sonar tag was duty cycled on a 4 h on and 4 h off basis. This allowed comparisons of the animals’ dive behavior during periods when the tag was pinging to periods when it was not, based on a similar set of dive characteristics as used in an earlier study of translocated elephant seals exposed to the Acoustic Thermometry of the Ocean Climate (ATOC) low-frequency sound source . At the time of animal release, the tag was programmed to be off. The track and dive behavior of the tagged seals were also compared to previously translocated seals not instrumented with the sonar tag. Blood samples were collected in serum and EDTA plasma tubes from tagged animals at the time of initial capture and post-translocation in order to examine changes in stress hormones. Samples were kept on ice until centrifugation and stored at −80 °C until analysis. Serum cortisol and plasma epinephrine (EPI), norepinephrine (NE), and adrenocorticotropic hormone (ACTH) were measured in duplicate using commercially available radioimmunoassay (RIA) kits (Siemens, Salem NH; Alpco, Salem, NH) previously validated for use in elephant seals [42, 43]. The average duplicate coefficients of variation for the assays were 2.2, 2.7, 2.5 and 3.1 % for cortisol, EPI, NE and ACTH, respectively.
Tag data analysis
Acoustic data collected in binary format by the sonar tag were unpacked and processed using custom Matlab-based routines. The raw data were converted to absolute (i.e., calibration-corrected) volume backscattering strength, also corrected for range and attenuation. Volume backscattering strength represents the summed contribution of backscattering from all targets present, normalized to sample volume. Backscattering is a complicated function of both the abundance of scatterers present and their nature (e.g., composition, size, and orientation); here we use volume backscattering strength as a relative index of animal abundance. The acoustic data were integrated with the track and dive data from the GPS-TDR tag based on their respective time records, which were synchronized at deployment and recovery. GPS locations were filtered using a simple forward-backward speed filter to eliminate any erroneous locations , using a conservative threshold maximum speed of 20 km h−1. The TDR data were analyzed using custom Matlab algorithms to classify dives into categories of travel dives (combining the A- and B-types of LeBoeuf et al. ), pelagic foraging dives (D-type), benthic dives (E-type), and drift or processing dives (C-type) following established classification schemes [44, 45]. A variety of dive metrics were also quantified including dive duration, maximum depth, amount of time spent in the bottom phase of the dive, descent/ascent rates, post-dive interval duration, and the number of inflections during the descent/bottom/ascent phases of the dive.
Source level and performance tests
Source level calibrations were conducted operating the transmitter at input voltages of 0.6, 1, 1.5, 3, and 6 V and at the transmit signal frequency of 200 kHz, source levels on-axis were ca. 150, 165, 170, 180, and 190 dB (re. 1 μPa RMS Hz−0.5 at 1 m), respectively. The goal of the source level calibrations relative to frequency was to determine operational voltages for which the source level would be as low and as close to inaudible to the seal as possible in its hearing band while also maintaining reasonable signal-to-noise ratios (SNR). The upper frequency cutoff for northern elephant seal hearing in water is ca. 55 kHz, and in the 1–55 kHz band where the seal’s hearing is best, the hearing threshold is ca. 60 dB re. 1 μPa at 1 m . Source levels in this 1–55 kHz band were relatively flat and above the 60 dB threshold (Fig. 1); the prototype system thus unfortunately produced sound potentially audible to the seal. Calibrations of source level relative to angle off-axis confirmed that the transducer was highly directional, with source levels at 90 ° and 180 ° off-axis minimally 20 dB lower than on-axis (Fig. 1). The transducer was to be mounted on its side, meaning that the sound output at 90 ° would be toward the animal’s head/ears while sound output on-axis and at 180 ° would be at angles in a direction away from the animal. Operating the system at 3 V or less resulted in source levels in the 1–55 kHz band below 150 dB in a direction away from the animal (i.e., on-axis and 180 °) and ca. 100 dB (close to the noise floor of the calibration equipment) toward the animal (90 °). Tests of SNR conducted with standard targets suspended at a series of ranges and operating at voltages of 0.1 to 6 V determined that 0.6 V was the minimum voltage in order to maintain an acceptable SNR (i.e., in excess of 10 dB) at a range of 2 m for a target with target strength of −50 dB (an estimated minimum target strength for potential elephant seal prey). Small fishes (<10 cm) were often observed during calibrations in the coastal test facility, confirming the tag’s ability to detect such targets at operational voltages as low as 0.6 V (data not shown).
Four test field deployments were conducted between April 6 and May 11, 2012 (Table 1). Given that the tag was likely audible to the seal when underwater, power was increased on successive deployments to assess and avoid effects the tag might have on the animals. The first two animals were deployed with the system operating at 1 V (transmitter input voltage) with the transducers mounted on the animals’ shoulders and aimed to the side. Following successful recovery of these first two animals and examination of the track and dive data for signs of aberrant behavior, incremental modifications were made for the next two animals. In the third animal, the voltage was increased to 3 V in order to achieve higher source levels, and hence improved signal-to-noise ratios and increased ranges to which targets could be detected, while for the fourth animal, the voltage was set to 1 V and the transducer was mounted on the animal’s head in order to sample water immediately in front of it (Table 2). In all cases, data were collected to a range of 22 m from the animal, although useable data were mostly restricted to shorter ranges by SNR.
All four translocations proceeded smoothly and the animals were released and later recovered in good health (Fig. 2). The first two individuals were known to have been born at Año Nuevo, while the second two were of unknown origin. The seals took 3–18 days to return to a colony, conducting a regular series of dives during the return transit to depths of up to 778 m (e.g., Fig. 3b). For seal #1, a failure of the SD card led to the sonar tag only pinging for three 4-h “on” intervals and the animal returned to Año Nuevo long after the tag ceased to transmit (Additional file 1: Figure S1; Tables 1 and 2). For seals #2 and #3, the duty cycling operated as programmed and the tags were still functioning when the animals returned to the Año Nuevo colony (Tables 1 and 2). Seal #4 returned to Santa Rosa Island off southern California after 18 days. The tag operated as programmed for the first 8.05 days, after which it ceased pinging, presumably due to battery failure (Additional file 2: Figure S2).
Regions of enhanced acoustic backscattering were observed on all four deployments corresponding to known scattering features. For all of the animals, during time periods spent at the surface between dives, strong scattering associated with the ocean surface was observed (e.g., Fig. 3c–e). During many dives, especially those categorized as benthic-type, strong backscattering from the bottom was also evident at very close ranges (<1 m) and at depths consistent with the bathymetry of the region, indicating that the animals often spent protracted periods of time during dives in close association with the bottom (e.g., Fig. 4). For seal #4, for instance, the animal spent the initial 3.5 days post-release near the Monterey Peninsula, repeatedly moving from shallow (<100 m) nearshore waters into deep waters, and then back again (region 1 in Fig. 2), conducting mostly benthic-type dives. Scattering observed during this time period was mostly associated with bottom returns and showed evidence of the animal following the bottom as it moved in and out of shallow regions (Fig. 4). The exact angles of the transducers relative to the animals were not measured, but were approximately horizontal; assuming that the first bottom return was detected in the second side-lobe (at 45 ° off-axis), a return at 1 m would suggest that the transducer (and hence the top of the animal’s back or head) was only 70.7 cm from the bottom. Returns from closer ranges and/or detected in the first side-lobe or the main lobe would suggest an even closer association with the bottom. Little scattering suggestive of animal-released bubbles  was observed, with the exception of occasional periods of regular enhancements in backscattering at close range observed during the ascents and descents of dives conducted by seal #1 (Additional file 1: Figure S1E).
Backscattering levels measured in the water column were generally low for the three animals deployed with the sonar tag operating at 1 V and mostly limited to ranges <4 m by noise. Intermittent observations of enhanced water column backscattering were made, however, often associated with particular dive and movement behaviors. Comparisons between the four deployments are complicated by differences in deployment protocols (i.e., tag voltage and transducer position), dive behaviors, time spent at liberty, and geographic regions occupied, but patterns were evident within datasets. Seal #2 mostly performed dives categorized as travel-type and benthic-type, and made no pelagic foraging-type dives during time periods when the tag was pinging (Fig. 3b). Low scattering was observed during travel-type (i.e., U-shaped) dives (Fig. 3c), particularly during the time period of relatively directional horizontal movement as the animal moved from the deeper waters at the mouth of Monterey Canyon back toward Monterey Bay (Fig. 3a, region 1). As the animal moved into Monterey Bay and adopted a more tortuous track along the northern flank of Monterey Canyon (Fig. 3a, region 2), it undertook benthic-type dives, defined by prolonged amounts of time spent at relatively constant depths, during which high acoustic scattering levels were measured to ranges of up to 3–4 m, suggestive of multiple relatively strong targets in the vicinity of the animal (Fig. 3e, f). Later, during a period of more directional movement along the coast and toward the Año Nuevo colony (Fig. 3a, region 3), benthic-type dives continued, but with much reduced levels of backscattering (Fig. 3d). During both periods of benthic-type dives, scattering from the bottom was intermittently observed (Fig. 3d, e), supporting the common inference from TDR data that such dives reflect a close association with the seafloor . Over the course of the entire deployment, mean volume backscattering strength differed significantly between dive types (Kruskal-Wallis non-parametric one-way ANOVA chi-square test statistic = 45.47, p < 0.001; Fig. 5a). Tukey-Kramer post hoc tests suggested that backscattering during dives categorized as travel-type was significantly lower than drift dives (thought to be postprandial) and benthic dives. Those benthic dives associated with the time the animal adopted a more tortuous track when near the northern flank of Monterey Canyon were associated with significantly greater backscattering than benthic dives conducted at other times (Fig. 5a). Of the metrics calculated to characterize the animal’s dives, the strongest correlates of mean volume backscattering strength observed during the dives were maximum dive depth (ρ = −0.48, p < 0.001) and the animal’s longitude (ρ = 0.69, p < 0.001) (Fig. 5b, c).
Foraging-type dives conducted at a time when the sonar tag was pinging were only observed for seal #4. This individual was at liberty the longest and spent a prolonged period of time conducting repeated deep dives (mostly >200 m) over a period of 4.5 days after departing Monterey Bay and before the batteries on the sonar tag failed as the animal headed south (Additional file 2: Figure S2C, D); seal #4 was also the one animal with the acoustic transducer mounted on its head. Nine dives conducted while the tag was pinging were categorized as foraging-type, and in all nine instances, enhanced scattering stemming from strong single targets was evident (e.g., Fig. 6), primarily during the bottom phases of dives rather than during the ascent or descent. Similar strong single targets in close proximity to the animal’s head were also evident, however, during dives categorized as travel- and drift-type. In multiple instances during both foraging- and travel-type dives, successive measurements indicated the presence of scatterers getting increasingly close to the animal (e.g., Fig. 6).
Backscattering observations consistent with the deep scattering layer were made from seal #3, the only animal for which the sonar tag was operated at the higher power level of 3 V. After release, seal #3 remained for some time along the Monterey Peninsula conducting mostly shallow benthic-type dives, during which the backscattering was dominated by bottom returns, before moving across the mouth of Monterey Canyon and on to the Año Nuevo colony (Additional file 2: Figure S2A, B). During the period spent near the mouth of the canyon (region 3 in Fig. 2), the animal conducted a series of deep dives classified as travel-type. During many of these dives, high scattering levels and multiple individual targets were observed to ranges in excess of 15 m, suggestive of aggregations of strong scatterers (Fig. 7). These scatterers were most abundant at depths of 280–340 m and were observed repeatedly as the animal passed through this depth range (Fig. 7c). Similar observations of multiple targets made at these relatively large ranges in this depth layer were not evident for the other seals where the sonar tag operated at lower voltages.
Tag effect tests
Examination of the dive data indicated mostly normal behavior. On five occasions out of the 43 total times when a tag started the pinging phase of its duty cycle, the seal soon dived to deeper depths (Fig. 8a). On five different occasions, the tag started pinging as the seal was ascending from a dive and the animal aborted surfacing and dived deeper (Fig. 8b). For both of these unusual dive behaviors, only the dive during which the tag started pinging was affected, after which no abnormal behavior was evident. In the one animal deployed with the sonar tag operating with higher source level (3 V), somewhat atypical diving behavior was evident during two periods when the animal was in deep waters at the mouth of Monterey Bay and spent protracted time at the surface with infrequent dives (Fig. 8c); it is noteworthy, however, that this protracted surface period actually commenced at a time when the tag was not pinging. No obvious changes in diving behavior were evident once the tags stopped pinging entirely for those two animals where the tag ceased pinging while the animal was still at liberty (Additional file 1: Figure S1B and Additional file 2: Figure S2D).
Dive characteristics were also quantified and compared for each animal between times when the tag was pinging vs. when it was not. Statistical comparison of all dives made with the tag pinging relative to those made with it not pinging for each seal showed some significant differences for some dive metrics for seals #1–3 (Table 3). These differences were not consistent across all three seals, however, and in some instances the direction of the differences differed; time spent in the bottom phase of dives, for instance, was significantly greater when the tag was pinging vs. not for seal #1, but significantly greater when the tag was not pinging for seals #2 and #3. To some extent, these comparisons for the first three seals may have been limited by the short deployment durations and small sample sizes, with influences on dive behaviors of the tag being confounded by changes in the seals’ location and behavior as they made their way back to the colony. Seal #4 provided the largest sample of dives and showed no significant differences in dive characteristics when the sonar tag was on vs. off other than a slightly higher descent rate when the tag was pinging (Table 3). These analyses based on comparison of individual dives may also be limited by possible serial correlation in dive behavior; statistical comparison of dive metrics averaged over all dives made during intervals where the tag was pinging vs. intervals where it was not, however, similarly found few significant differences (in only three of the instances revealed by the by-dive analysis as significant) (Table 3).
Blood serum cortisol and catecholamine concentrations showed some individual variation, but were within the 95 % confidence limits of published baseline values in juvenile elephant seals [42, 47]. Across the four animals, the concentrations of ACTH, cortisol, and catecholamines (NPI, NE) at the time of recapture did not differ significantly from samples made at initial capture (Table 4; paired t tests, p > 0.05), suggesting no long-term activation of the hypothalamic-pituitary-adrenal axis due to carrying the tags.
Overall, the test deployments of the prototype sonar tag described here demonstrate the value of acoustic measurements made from free-ranging animals based on echosounders attached to the animals themselves and, despite the experimental nature of these tests, also allow certain initial insight into elephant seal foraging ecology. Measurements of enhanced acoustic scattering in some instances indicative of the bottom and in others potentially indicative of prey were made from all four of the translocated elephant seals, complementing and enhancing the concurrent information provided by the position- and depth-logging tags.
Seal #4 was the one animal where the sonar tag was deployed with the transducer mounted on its head sampling water immediately in front of it and also spent the longest time at liberty due to its returning to the Santa Rosa Island colony off southern California (ca. 410 km away from Año Nuevo). Likely as a result, this seal displayed dive behavior that included a series of dives classified as pelagic foraging-type under the traditional dive classification scheme of LeBoeuf et al.  on the basis of inflection points in the TDR data during dive bottom phases, thought to be indicative of foraging. Strong acoustic targets were observed during all of these identified foraging dives associated with the dive bottom phase periods of inflection points. These targets and their association with putative foraging dives are suggestive of prey, although the sonar tag measurements alone cannot confirm whether or not these scatterers are prey or simply non-prey nearby to the animal; in applications of passive acoustic recording tags to echolocating odontocetes, for instance, echoes from nearby strong targets are often observed but based on other indicators of feeding are apparently not selected as prey (see review in ).
Even though with the sonar tag operating at 1 V targets were mostly only detected against background noise levels to ranges of ca. 2 m from the animal, during foraging dive bottom phases and periods of inflections in the TDR data, multiple instances were observed of targets getting increasingly close to the animal. In some cases, targets appeared as the seal was descending or ascending in the water column and then became successively closer as the animal changed direction (e.g., Fig. 6b), as might be expected during active prey pursuit, although it is difficult with the present data to distinguish pursuit from the animal simply approaching a stationary target. It is noteworthy that similar patterns of strong targets potentially consistent with prey were also observed during dives by this seal made close in time and location to the foraging dives but classified as travel- and drift-type. Using accelerometers affixed to the jaws of individual adult female elephant seals during their post-breeding winter migration, Naito et al.  similarly detected jaw motions indicative of feeding during all dive types other than drift dives, and not just during foraging-type dives. Together with the present results, this suggests that dive behaviors and the functions of different dive types may be more complex than has previously been thought based on TDR data alone.
For the three animals with the transducer mounted on the shoulders and aimed to the side, time spent at liberty was shorter than for seal #4 and movements were restricted to the Monterey Bay vicinity. Nonetheless, regions of enhanced backscattering were evident during certain portions of each animal’s transit to the Año Nuevo colony. None of these animals conducted dives categorized as pelagic foraging-type during times when the sonar tag was pinging. Seal #2 did, however, conduct a series of benthic-type dives along the northern flank of Monterey Canyon at the same time as its horizontal track became more tortuous and less directional. Acoustic scattering was significantly enhanced at this time relative to nearby dives also categorized as benthic-type that did not show enhanced scattering and where the horizontal track was more directional. Demersal foraging has been speculated as one possible function of these benthic-type dives . The enhanced acoustic scattering observed during the dives along Monterey Canyon was collected with the transducer aimed to the side of the animal, and hence, these measurements likely do not represent prey targeted at that moment, but they nonetheless may be indicative of overall greater prey availability during the dives conducted in that region and time period. Bottom scattering was evident during both periods of benthic-type dives, supporting the earlier inference that the prolonged time spent at relatively constant depths that characterize such dives reflect a close association with, and perhaps constraint by, the bottom .
Seal #3 conducted a series of travel-type dives where aggregations of strong scatterers were observed to ranges in excess of 15 m from the animal (and to its side relative to the transducer mounted on the seal’s back). Based on these data, it is not certain whether the seal was simply passing through these aggregations or foraging during these dives (despite their having been classified as travel- rather than foraging-type). It is noteworthy, however, that Naito et al.  detected jaw motions indicative of feeding during descents and ascents as well as during the bottom phases of dives. Irrespective of whether or not seal #3 was foraging, these measurements demonstrate the ability of the sonar tag to characterize scatterer abundance in the water column and provide a quantitative descriptor of the animal’s environment, as has been done previously using passive acoustic measurements of backscattering made from echolocating beaked whales . Findings such as the correlation of mean dive backscattering with longitude for seal #2 furthermore demonstrate the potential of using the seal effectively as an autonomous platform for oceanographic observation in order to map regional backscattering patterns. Similarly, in addition to measurements of water column scattering, bottom returns were clearly detected during all four deployments. The sonar tag can thus additionally be used as an altimeter to estimate height off the bottom during dives (similar to ), potentially providing insight into the means by which elephant seals travel and navigate. In locations where bathymetry data are sparse or unavailable, this information could also be used to map bottom depth, similar to how the depth of southern elephant seals’ benthic dives have been used as an estimate of bathymetry in under-sampled regions of the Antarctic continental shelf .
The single-frequency measurements made by the sonar tag do not provide enough information to make inferences about the exact nature of observed water column scatterers based on the acoustic data themselves, but the targets are likely to be geometric scatterers of size greater than the acoustic wavelength of 0.75 cm. The depths of the targets and aggregations observed by seals #3 and #4 (ca. 280–350 m) are also consistent with the off-shelf deep scattering layer, typically thought to be composed of a mixture of small fishes (e.g., myctophids) and large invertebrates (e.g., squid, shrimp, gelatinous organisms) . Although insights were gained about the seal’s environment and availability of possible prey, because the present prototype system was limited in the voltages, and hence source levels, at which it was operated, overall few targets were observed and measurements of water column scatterers at 1 V were limited to ca. 4 m. With the system operating at 3 V, observations of acoustic targets were made to ranges greater than 15 m, however, far exceeding the limits of camera systems associated with the rapid attenuation of light in seawater and highlighting the ability of the sonar tag to make high resolution and frequent measurements to relatively large ranges.
Previous studies have enjoyed a great deal of success in studying the foraging ecology of elephant and other seal species using indirect indices of foraging based on dive behavior [e.g., 9, 10, 20, 44, 51] and horizontal movement patterns [e.g., 3, 14, 16, 18], indices of buoyancy indicative of successful foraging [e.g., 9, 10, 17, 20], measurements of stomach temperature as an indicator of prey consumption , and more recently measurements made with accelerometers to measure jaw motion  and acoustic transceivers designed to measure the at-sea associations of multiple animals instrumented with acoustic pinger tags [53, 54]. The acoustic measurements made by the sonar tag do not themselves provide evidence that observed targets are prey, but they do provide a relative indication of the abundance and potentially size of nearby animals. The potential insight into foraging ecology promised by the sonar tag thus complements the mostly indirect information provided by these approaches with direct observations of nearby organisms and extends the time scales over which information can be collected; by providing measurements to relatively large ranges, the sonar tag also offers potentially valuable information to understanding foraging and fine scale prey capture behaviors through observations of organisms not targeted and/or not captured and estimates of encounter rates. Measurements of backscattering from free-ranging animals have provided substantial insight into prey distribution and foraging ecology for echolocating odontocete species, using passive acoustic recording tags (notably the DTAG ) that receive backscattering arising from the echolocations of tagged individuals ; the sonar tag extends possibilities for such on-animal measurements of backscattering to non-echolocating species. Future deployments of the sonar tag in conjunction with other approaches (e.g., jaw accelerometers and video systems) would provide greater insight into questions such as whether or not observed acoustic targets represent prey, whether associated patterns in the TDR data represent pursuit, and whether targets are captured.
The behavior of the animals instrumented with the sonar tag was consistent with that of previously studied animals with data-logging tags attached, but without the sonar tag . Previous studies have found no detectable effect of typical tag packages (e.g., TDR, radio transmitters) on the homing rate or homing speed of translocated elephant seals , and our emphasis was thus on examining the potential impact of bearing the sonar tag, in addition to the other complement of other instruments attached to our study seals. The experimental animals took 3–18 days to return to a colony, with three of the individuals returning to the Año Nuevo colony and the fourth to the colony at Santa Rosa Island. Previous translocation studies have found that the majority of animals swim in a directional fashion to Año Nuevo, but that a minority takes a more circuitous route and requires a longer time to return (>7 days), and infrequently (ca. 10–20 %), animals will return to a colony other than Año Nuevo (, D. Costa unpublished observations). Our findings thus fall within the range of observations of previous studies. The fact that the one animal returned to a colony other than the Año Nuevo location where it was captured is also less surprising given that it was not known whether or not this animal was born at Año Nuevo.
The operational frequency of 200 kHz was chosen to be well outside of the seal’s known hearing range , and the transducer’s relatively strong performance in the 1–55 kHz band where the animal can hear was unexpected. Although we were able to take measures to reduce this off-band output, budget constraints prevented us from realizing fully our design goal of having the sonar tag be entirely inaudible to the seal. The threshold for reversible hearing effects (i.e., temporary threshold shift) within the elephant seal’s hearing range has been shown to be ca. 140–150 dB (received level) based on behavioral psychophysical studies of responses to signals of 500 ms in duration [56, 57]. Given the off-axis source levels and much shorter durations (150 μs) of the sonar tag’s signals, the sound levels received by the seal were certainly much lower than this threshold for temporary loss of hearing sensitivity. We were mindful of the importance of examining the potential impact of the sonar tag on the test animals since, for instance, translocated northern elephant seals instrumented with passive acoustic data loggers that were exposed to the Acoustic Thermometry of the Ocean Climate (ATOC) low-frequency sound source exhibited subtle changes in their diving behavior . Unusual dive patterns were in some instances observed associated with the first dive in a 4-h pinging interval. Statistical comparisons of dive characteristics associated with times when the sonar tags were pinging vs. not pinging also showed some differences, although which characteristics and the direction of the effect differed between individuals and did not show any consistent patterns. Overall, effects of the sonar tag on seal behavior appeared relatively minor and mostly associated with the start of a 4-h pinging interval. Furthermore, the concentrations of stress hormones measured in blood sampled at the time of recapture did not differ significantly from samples made at initial capture and were typical for free-ranging juveniles [42, 47]. Characterization of hormones associated with the generalized stress response is a common method for evaluating the significance of a disturbance on marine mammals and information regarding stress markers is informative on the effects of varying stress levels on individuals’ health . These results thus suggest that the fact that the tag was likely audible to the seals did not cause them any long-term stress .
A miniaturized high-frequency autonomous echosounder was developed, and a series of four successful test deployments of this prototype sonar tag was conducted on juvenile elephant seals translocated short distances away from their colony at Año Nuevo State Reserve, California. During dives made over the course of their return transits, measurements were made of enhanced acoustic scattering consistent in some instances with potential prey and in others with the bottom, often associated with particular dive and movement behaviors. Strong backscattering from the bottom was observed during dives identified as benthic-type under the traditional classification scheme of LeBoeuf et al. , confirming a very close (often <1 m) association with the seafloor; enhanced near-bottom backscattering during a subset of these dives suggested possible demersal foraging . Measurements of water column backscattering were mostly low during travel-type dives, with the exception of one animal that transited repeatedly through a depth range of strong acoustic targets consistent with the deep scattering layer. The one animal that spent the longest amount of time at liberty conducted a series of deep off-shelf dives classified as pelagic foraging-type during which strong acoustic targets were observed, in multiple instances getting increasingly close to the animal. These observations are possibly consistent with prey pursuit although the sonar tag measurements alone do not provide conclusive evidence that observed targets are prey. Similar patterns of strong targets at depth were also evident during dives classified as travel-type, possibly suggesting that the functions of different dive types may be more complex than has been thought based on time-depth recorder data alone.
The initial data described here demonstrate the value of acoustic observations of nearby organisms made from free-ranging animals based on echosounders attached to the animals themselves. Such observations hold potential for characterizing prey distributions and providing insight into foraging ecology, both complementing and enhancing the information provided by traditional position- and depth-logging tags. The key advantages of the sonar tag lie in a combination of high resolution and frequent measurements made to relatively large ranges; as a result, ecologically meaningful measurements were made to ranges in excess of 15 m, exceeding, for instance, the limits of optical systems associated with the rapid attenuation of light in seawater.
Although the data described here show promise, the prototype system has certain limitations that need to be addressed before the sonar tag can be used more widely. Despite the fact that the behavioral effects appeared relatively minor, a key next step is to seek to make the system inaudible to the seal. Likewise, while at this experimental stage, the size of the prototype system was deemed acceptable as it was designed to be no larger in size than previous instrumentation deployed on juvenile elephant seals  and all four seals did return to a colony and exhibited generally normal swimming behavior, the prototype system is overly cumbersome and needs to be miniaturized further. Finally, the battery life of the current system is presently ca. 8–10 days, but should be extended since longer deployment durations would be valuable to study elephant seal foraging ecology during their long periods spent at sea. Future efforts will thus focus on a series of modifications to the current tag design including the following: (1) reducing the system’s output in the seal’s hearing band while simultaneously increasing the output at the operational frequency, in part by using a higher frequency; (2) further miniaturization and design of a more hydrodynamic housing; and (3) increasing the maximum deployment duration through more efficient power consumption and duty cycling. Pending the continued success of this development, our hope is to use the sonar tag in studies of the foraging ecology and habitat use of adult female elephant seals over the broad spatial scales over which they migrate and over the long time periods that they spend at sea. Ultimately, the sonar tag potentially could be deployed on any marine animal large enough to bear it and where tag attachment and recovery is feasible.
analysis of variance
Acoustic Thermometry of the Ocean Climate
digital signal processor
Global Positioning System
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This work was conducted under National Marine Fisheries Service permit #14636 and with the approval of the WHOI and UCSC Institutional Animal Care and Use Committees. We gratefully acknowledge the field assistance and seal handling capabilities of Selene Fregosi, Michael Tift, Sarah Peterson, Claudio Rojas, and John Harley. Keenan Ball provided much appreciated assistance with source level calibrations. The measures taken to assess any negative effects on the study animals benefited substantially from discussions with Peter Tyack and Mark Baumgartner. The board upon which the sonar tag was based was originally designed by Thomas Austin and Eugene Terray. Support for tag development was provided by The Cecil H. and Ida M. Green Technology Innovation Awards. The elephant seal fieldwork was supported by the E&P Sound and Marine Life Joint Industry Project of the International Association of Oil and Gas Producers (JIP2207–23), The Ida Benson Lynn Endowed Chair in Ocean Health, and grant N00014-10-1-0356 from the Office of Naval Research. Recapture of the fourth seal at Santa Rosa Island was supported by the Margaret A. Cargill Foundation.
The authors declare that they have no competing interests.
This study and the sonar tag concept were conceived jointly by GLL, DPC, ACL, and PHW. FMJ, ACL, GLL, and PHW designed the sonar tag, guided with input specific to the elephant seal application by DPC and LAH. FMJ and JRF built the two prototype sonar tag units and conducted calibrations and initial performance tests. LAH, DPC, GLL, PHW, and DEC designed the translocation experiments, which were executed by LAH, DPC, FMJ, JRF, GLL, and PHW. GPS and TDR data were processed by LAH, stress hormone samples were processed by DEC, and sonar data were processed by FMJ, ACL, JRF, and GLL. GLL conducted data synthesis and statistical analysis. All authors helped to draft the manuscript and read and approved the final manuscript.
Track, dive, and acoustic data associated with translocated seal #1. (A) Track and (B) dive data for seal #1, with green denoting times when the sonar tag was pinging. (C) A one hour’s worth subset of the acoustic data associated with the region denoted by 1 in panels A and B with volume backscattering strength (dB) plotted on the color scale relative to time and range from the animal. Scattering from the surface and bottom are clearly evident. (D) The same acoustic data as in panel C corrected for the depth of the animal; note that for ease of presentation the acoustic data are plotted starting at the animal’s depth and extending vertically downwards even though the transducer was mounted on the animal’s back sideways looking. (E) Enhanced water column scattering observed during the ascent phase of the first dive shown in panel D. Such regular patterns of enhanced backscattering were evident during the descent and ascent phases of multiple of the animal’s dives.
Track, dive, and acoustic data associated with translocated seals #3 and #4. (A) Track and (B) dive data associated with translocated seal #3, with green denoting times when the sonar tag was pinging. Note the periods of prolonged surface-associated behavior punctuated by few very deep dives when the sonar tag was pinging while the seal was in deep waters at the mouth of Monterey Canyon. Region denoted by 1 in panels A and B indicates the location of the acoustic data shown in Fig. 7. (C) Track and (D) dive data for seal #4. Regions denoted by 1 and 2 in panels C and D indicate the location of acoustic data shown in Figs. 4 and 6, respectively.
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Lawson, G.L., Hückstädt, L.A., Lavery, A.C. et al. Development of an animal-borne “sonar tag” for quantifying prey availability: test deployments on northern elephant seals. Anim Biotelemetry 3, 22 (2015). https://doi.org/10.1186/s40317-015-0054-7
- Northern elephant seal